Dca42570.1
Annotation
- 3-exons
- f-1
- sp|A5C6U7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004899#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold4793)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42570.1 |
153 |
344 |
348 |
35.05 |
192 |
64 |
2e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C6U7_VITVI |
495 |
686 |
2452 |
7.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42570.1 |
185 |
344 |
348 |
16.09 |
160 |
34 |
2e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
213 |
368 |
707 |
22.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4793 |
Augustus |
mRNA |
10556 |
14451 |
. |
+ |
. |
ID=Dca42570.1;Parent=Dca42570 |
| scaffold4793 |
Augustus |
exon |
10556 |
10947 |
. |
+ |
. |
ID=Dca42570.1.exon1;Parent=Dca42570.1 |
| scaffold4793 |
Augustus |
exon |
11388 |
12030 |
. |
+ |
. |
ID=Dca42570.1.exon2;Parent=Dca42570.1 |
| scaffold4793 |
Augustus |
exon |
14440 |
14451 |
. |
+ |
. |
ID=Dca42570.1.exon3;Parent=Dca42570.1 |
