Carnation DB

Dca42639.1

Annotation

5-exons
f-1
sp|F6I658_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0046g02000#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
AT3G61490.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:22758439-22760137 FORWARD LENGTH=476
Repeat List (scaffold48)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42639.1	18	475	475	70.94	458	74	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I658_VITVI	27	476	479	93.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42639.1	36	475	475	67.36	440	72	0
Target_name	Start	End	Length	Cov(%)
AT3G61490.1	33	476	476	93.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold48	Augustus	mRNA	389609	392043	.	-	.	ID=Dca42639.1;Parent=Dca42639
scaffold48	Augustus	exon	389609	390318	.	-	.	ID=Dca42639.1.exon1;Parent=Dca42639.1
scaffold48	Augustus	exon	390421	390491	.	-	.	ID=Dca42639.1.exon2;Parent=Dca42639.1
scaffold48	Augustus	exon	390848	391022	.	-	.	ID=Dca42639.1.exon3;Parent=Dca42639.1
scaffold48	Augustus	exon	391102	391222	.	-	.	ID=Dca42639.1.exon4;Parent=Dca42639.1
scaffold48	Augustus	exon	391693	392043	.	-	.	ID=Dca42639.1.exon5;Parent=Dca42639.1