Dca42774.1
Annotation
- 3-exons
- f-1
- sp|Q9SL06_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05610#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold4824)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42774.1 |
25 |
330 |
362 |
44.47 |
306 |
46 |
2e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SL06_ARATH |
412 |
761 |
780 |
44.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42774.1 |
223 |
324 |
362 |
9.11 |
102 |
33 |
8e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1307 |
1408 |
1539 |
6.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4824 |
Augustus |
mRNA |
10105 |
13036 |
. |
- |
. |
ID=Dca42774.1;Parent=Dca42774 |
| scaffold4824 |
Augustus |
exon |
10105 |
10532 |
. |
- |
. |
ID=Dca42774.1.exon1;Parent=Dca42774.1 |
| scaffold4824 |
Augustus |
exon |
10814 |
11387 |
. |
- |
. |
ID=Dca42774.1.exon2;Parent=Dca42774.1 |
| scaffold4824 |
Augustus |
exon |
12950 |
13036 |
. |
- |
. |
ID=Dca42774.1.exon3;Parent=Dca42774.1 |
