Carnation DB

Dca42946.1

Annotation

6-exons
f-1
sp|A5BMY6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_008033#GO:0003676;GO:0000166#2F0P0C
AT4G09040.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:5795075-5797315 REVERSE LENGTH=304
Repeat List (scaffold486)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42946.1	11	270	531	22.41	260	39	2e-48
Target_name	Start	End	Length	Cov(%)
sp\|A5BMY6_VITVI	6	293	294	97.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42946.1	96	250	531	16.94	155	48	7e-41
Target_name	Start	End	Length	Cov(%)
AT4G09040.1	87	275	304	62.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold486	Augustus	mRNA	30433	33687	.	+	.	ID=Dca42946.1;Parent=Dca42946
scaffold486	Augustus	exon	30433	30831	.	+	.	ID=Dca42946.1.exon1;Parent=Dca42946.1
scaffold486	Augustus	exon	31184	31471	.	+	.	ID=Dca42946.1.exon2;Parent=Dca42946.1
scaffold486	Augustus	exon	31584	31726	.	+	.	ID=Dca42946.1.exon3;Parent=Dca42946.1
scaffold486	Augustus	exon	31900	32111	.	+	.	ID=Dca42946.1.exon4;Parent=Dca42946.1
scaffold486	Augustus	exon	32715	32837	.	+	.	ID=Dca42946.1.exon5;Parent=Dca42946.1
scaffold486	Augustus	exon	33257	33687	.	+	.	ID=Dca42946.1.exon6;Parent=Dca42946.1