Carnation DB

Dca43012.1

Annotation

7-exons
f-1
sp|G7JX27_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g053280#GO:0005524;GO:0016887;GO:0071722#2F1P0C
AT1G26090.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:9020509-9022619 FORWARD LENGTH=455
Repeat List (scaffold487)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43012.1	7	369	376	56.91	363	59	7e-123
Target_name	Start	End	Length	Cov(%)
sp\|G7JX27_MEDTR	37	397	440	82.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43012.1	6	369	376	51.06	364	53	2e-108
Target_name	Start	End	Length	Cov(%)
AT1G26090.1	53	412	455	79.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold487	Augustus	mRNA	88784	92088	.	+	.	ID=Dca43012.1;Parent=Dca43012
scaffold487	Augustus	exon	88784	88882	.	+	.	ID=Dca43012.1.exon1;Parent=Dca43012.1
scaffold487	Augustus	exon	90396	90539	.	+	.	ID=Dca43012.1.exon2;Parent=Dca43012.1
scaffold487	Augustus	exon	90628	90702	.	+	.	ID=Dca43012.1.exon3;Parent=Dca43012.1
scaffold487	Augustus	exon	90802	90995	.	+	.	ID=Dca43012.1.exon4;Parent=Dca43012.1
scaffold487	Augustus	exon	91081	91255	.	+	.	ID=Dca43012.1.exon5;Parent=Dca43012.1
scaffold487	Augustus	exon	91460	91879	.	+	.	ID=Dca43012.1.exon6;Parent=Dca43012.1
scaffold487	Augustus	exon	92065	92088	.	+	.	ID=Dca43012.1.exon7;Parent=Dca43012.1
scaffold487	Augustus	mRNA	88784	92243	.	+	.	ID=Dca43012.2;Parent=Dca43012
scaffold487	Augustus	exon	88784	88882	.	+	.	ID=Dca43012.2.exon1;Parent=Dca43012.2
scaffold487	Augustus	exon	90396	90539	.	+	.	ID=Dca43012.2.exon2;Parent=Dca43012.2
scaffold487	Augustus	exon	90628	90702	.	+	.	ID=Dca43012.2.exon3;Parent=Dca43012.2
scaffold487	Augustus	exon	90802	90995	.	+	.	ID=Dca43012.2.exon4;Parent=Dca43012.2
scaffold487	Augustus	exon	91081	91255	.	+	.	ID=Dca43012.2.exon5;Parent=Dca43012.2
scaffold487	Augustus	exon	91460	91879	.	+	.	ID=Dca43012.2.exon6;Parent=Dca43012.2
scaffold487	Augustus	exon	92112	92243	.	+	.	ID=Dca43012.2.exon7;Parent=Dca43012.2