Carnation DB

Dca43044.1

Annotation

5-exons
f-1
sp|A5AH07_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_035911#unknown#0F0P0C
Os08t0125300-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold4878)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43044.1	1	362	744	31.04	362	61	4e-138
Target_name	Start	End	Length	Cov(%)
sp\|A5AH07_VITVI	116	499	557	68.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43044.1	1	336	744	18.54	336	34	6e-53
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	931	1336	1428	28.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4878	Augustus	mRNA	1205	4529	.	+	.	ID=Dca43044.1;Parent=Dca43044
scaffold4878	Augustus	exon	1205	1601	.	+	.	ID=Dca43044.1.exon1;Parent=Dca43044.1
scaffold4878	Augustus	exon	1809	2425	.	+	.	ID=Dca43044.1.exon2;Parent=Dca43044.1
scaffold4878	Augustus	exon	3026	3454	.	+	.	ID=Dca43044.1.exon3;Parent=Dca43044.1
scaffold4878	Augustus	exon	3626	3967	.	+	.	ID=Dca43044.1.exon4;Parent=Dca43044.1
scaffold4878	Augustus	exon	4080	4529	.	+	.	ID=Dca43044.1.exon5;Parent=Dca43044.1