Carnation DB

Dca43351.1

Annotation

6-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold4929)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43351.1	300	413	1689	2.01	114	30	2e-06
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	83	197	1114	10.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43351.1	400	1166	1689	13.73	767	30	4e-95
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	36	794	857	88.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4929	Augustus	mRNA	8595	20002	.	+	.	ID=Dca43351.1;Parent=Dca43351
scaffold4929	Augustus	exon	8595	9488	.	+	.	ID=Dca43351.1.exon1;Parent=Dca43351.1
scaffold4929	Augustus	exon	9820	13090	.	+	.	ID=Dca43351.1.exon2;Parent=Dca43351.1
scaffold4929	Augustus	exon	15070	15299	.	+	.	ID=Dca43351.1.exon3;Parent=Dca43351.1
scaffold4929	Augustus	exon	16348	16613	.	+	.	ID=Dca43351.1.exon4;Parent=Dca43351.1
scaffold4929	Augustus	exon	19445	19618	.	+	.	ID=Dca43351.1.exon5;Parent=Dca43351.1
scaffold4929	Augustus	exon	19768	20002	.	+	.	ID=Dca43351.1.exon6;Parent=Dca43351.1