Dca43415.1
Annotation
- 3-exons
- f-2
- sp|B9RER1_RICCO#tRNA pseudouridine synthase d, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1427850#GO:0009982;GO:0003723;GO:0001522#2F1P0C
- Repeat List (scaffold49432)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43415.1 |
1 |
80 |
82 |
54.87 |
80 |
56 |
6e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RER1_RICCO |
468 |
548 |
753 |
10.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43415.1 |
1 |
80 |
82 |
39.02 |
80 |
40 |
9e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G04820.1 |
446 |
525 |
715 |
11.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold49432 |
Augustus |
mRNA |
1 |
498 |
. |
+ |
. |
ID=Dca43415.1;Parent=Dca43415 |
| scaffold49432 |
Augustus |
exon |
1 |
62 |
. |
+ |
. |
ID=Dca43415.1.exon1;Parent=Dca43415.1 |
| scaffold49432 |
Augustus |
exon |
177 |
352 |
. |
+ |
. |
ID=Dca43415.1.exon2;Parent=Dca43415.1 |
| scaffold49432 |
Augustus |
exon |
487 |
498 |
. |
+ |
. |
ID=Dca43415.1.exon3;Parent=Dca43415.1 |
