Carnation DB

Dca43460.1

Annotation

18-exons
f-1
sp|D7TH25_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g02840#unknown#0F0P0C
AT3G11560.2 | Symbols: | LETM1-like protein | chr3:3639553-3645506 FORWARD LENGTH=872
Repeat List (scaffold4953)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43460.1	65	941	944	57.41	877	61	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TH25_VITVI	14	910	910	98.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43460.1	106	930	944	50.42	825	57	0
Target_name	Start	End	Length	Cov(%)
AT3G11560.2	31	859	872	95.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4953	Augustus	mRNA	6297	22290	.	+	.	ID=Dca43460.1;Parent=Dca43460
scaffold4953	Augustus	exon	6297	6490	.	+	.	ID=Dca43460.1.exon1;Parent=Dca43460.1
scaffold4953	Augustus	exon	7523	8000	.	+	.	ID=Dca43460.1.exon2;Parent=Dca43460.1
scaffold4953	Augustus	exon	8176	8267	.	+	.	ID=Dca43460.1.exon3;Parent=Dca43460.1
scaffold4953	Augustus	exon	9345	9506	.	+	.	ID=Dca43460.1.exon4;Parent=Dca43460.1
scaffold4953	Augustus	exon	9616	10009	.	+	.	ID=Dca43460.1.exon5;Parent=Dca43460.1
scaffold4953	Augustus	exon	11916	12034	.	+	.	ID=Dca43460.1.exon6;Parent=Dca43460.1
scaffold4953	Augustus	exon	12131	12203	.	+	.	ID=Dca43460.1.exon7;Parent=Dca43460.1
scaffold4953	Augustus	exon	12281	12501	.	+	.	ID=Dca43460.1.exon8;Parent=Dca43460.1
scaffold4953	Augustus	exon	12610	12654	.	+	.	ID=Dca43460.1.exon9;Parent=Dca43460.1
scaffold4953	Augustus	exon	14794	14881	.	+	.	ID=Dca43460.1.exon10;Parent=Dca43460.1
scaffold4953	Augustus	exon	15105	15296	.	+	.	ID=Dca43460.1.exon11;Parent=Dca43460.1
scaffold4953	Augustus	exon	16440	16540	.	+	.	ID=Dca43460.1.exon12;Parent=Dca43460.1
scaffold4953	Augus-PASA	exon	16680	16749	.	+	.	ID=Dca43460.1.exon13;Parent=Dca43460.1
scaffold4953	Augus-PASA	exon	18213	18362	.	+	.	ID=Dca43460.1.exon14;Parent=Dca43460.1
scaffold4953	Augus-PASA	exon	21011	21115	.	+	.	ID=Dca43460.1.exon15;Parent=Dca43460.1
scaffold4953	Augus-PASA	exon	21576	21746	.	+	.	ID=Dca43460.1.exon16;Parent=Dca43460.1
scaffold4953	Augus-PASA	exon	22023	22082	.	+	.	ID=Dca43460.1.exon17;Parent=Dca43460.1
scaffold4953	Augus-PASA	exon	22171	22290	.	+	.	ID=Dca43460.1.exon18;Parent=Dca43460.1