Carnation DB

Dca43495.1

Annotation

19-exons
f-1
sp|F6I157_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g01320#GO:0005488#1F0P0C
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:16599976-16605994 REVERSE LENGTH=1089
Repeat List (scaffold496)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43495.1	22	1080	1080	53.05	1059	51	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I157_VITVI	7	1115	1115	99.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43495.1	385	1079	1080	40.18	695	63	0
Target_name	Start	End	Length	Cov(%)
AT4G34830.1	397	1088	1089	63.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold496	Augustus	mRNA	111373	118799	.	-	.	ID=Dca43495.1;Parent=Dca43495
scaffold496	Augustus	exon	111373	111607	.	-	.	ID=Dca43495.1.exon1;Parent=Dca43495.1
scaffold496	Augustus	exon	111927	112020	.	-	.	ID=Dca43495.1.exon2;Parent=Dca43495.1
scaffold496	Augustus	exon	112147	112195	.	-	.	ID=Dca43495.1.exon3;Parent=Dca43495.1
scaffold496	Augustus	exon	112519	112611	.	-	.	ID=Dca43495.1.exon4;Parent=Dca43495.1
scaffold496	Augustus	exon	112713	112944	.	-	.	ID=Dca43495.1.exon5;Parent=Dca43495.1
scaffold496	Augustus	exon	113129	113219	.	-	.	ID=Dca43495.1.exon6;Parent=Dca43495.1
scaffold496	Augustus	exon	113516	113607	.	-	.	ID=Dca43495.1.exon7;Parent=Dca43495.1
scaffold496	Augustus	exon	113748	113856	.	-	.	ID=Dca43495.1.exon8;Parent=Dca43495.1
scaffold496	Augustus	exon	114049	114148	.	-	.	ID=Dca43495.1.exon9;Parent=Dca43495.1
scaffold496	Augustus	exon	114602	114742	.	-	.	ID=Dca43495.1.exon10;Parent=Dca43495.1
scaffold496	Augustus	exon	115318	115482	.	-	.	ID=Dca43495.1.exon11;Parent=Dca43495.1
scaffold496	Augustus	exon	115749	115922	.	-	.	ID=Dca43495.1.exon12;Parent=Dca43495.1
scaffold496	Augustus	exon	116013	116141	.	-	.	ID=Dca43495.1.exon13;Parent=Dca43495.1
scaffold496	Augustus	exon	116220	116335	.	-	.	ID=Dca43495.1.exon14;Parent=Dca43495.1
scaffold496	Augustus	exon	116421	116565	.	-	.	ID=Dca43495.1.exon15;Parent=Dca43495.1
scaffold496	Augustus	exon	116702	116765	.	-	.	ID=Dca43495.1.exon16;Parent=Dca43495.1
scaffold496	Augustus	exon	117104	117272	.	-	.	ID=Dca43495.1.exon17;Parent=Dca43495.1
scaffold496	Augustus	exon	117404	118121	.	-	.	ID=Dca43495.1.exon18;Parent=Dca43495.1
scaffold496	Augustus	exon	118473	118799	.	-	.	ID=Dca43495.1.exon19;Parent=Dca43495.1