Carnation DB

Dca43556.1

Annotation

5-exons
f-1
sp|B9SIT6_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0540820#unknown#0F0P0C
AT4G16510.1 | Symbols: | YbaK/aminoacyl-tRNA synthetase-associated domain | chr4:9302816-9304869 FORWARD LENGTH=232
Repeat List (scaffold4970)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43556.1	3	230	232	68.1	228	70	7e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9SIT6_RICCO	4	231	233	97.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43556.1	6	230	232	63.36	225	66	3e-81
Target_name	Start	End	Length	Cov(%)
AT4G16510.1	13	232	232	94.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4970	Augustus	mRNA	22252	26016	.	-	.	ID=Dca43556.1;Parent=Dca43556
scaffold4970	Augustus	exon	22252	22395	.	-	.	ID=Dca43556.1.exon1;Parent=Dca43556.1
scaffold4970	Augustus	exon	23473	23561	.	-	.	ID=Dca43556.1.exon2;Parent=Dca43556.1
scaffold4970	Augustus	exon	24396	24480	.	-	.	ID=Dca43556.1.exon3;Parent=Dca43556.1
scaffold4970	Augustus	exon	24565	24642	.	-	.	ID=Dca43556.1.exon4;Parent=Dca43556.1
scaffold4970	Augustus	exon	25714	26016	.	-	.	ID=Dca43556.1.exon5;Parent=Dca43556.1