Carnation DB

Dca43574.1

Annotation

7-exons
f-1
sp|B9HW81_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_769549#GO:0005507#1F0P0C
AT1G71040.1 | Symbols: LPR2 | Cupredoxin superfamily protein | chr1:26797201-26800224 REVERSE LENGTH=581
Repeat List (scaffold4974)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43574.1	226	770	770	49.61	545	71	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HW81_POPTR	29	573	573	95.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43574.1	210	769	770	48.18	560	67	0
Target_name	Start	End	Length	Cov(%)
AT1G71040.1	22	580	581	96.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4974	Augustus	mRNA	10387	19625	.	-	.	ID=Dca43574.1;Parent=Dca43574
scaffold4974	Augustus	exon	10387	10440	.	-	.	ID=Dca43574.1.exon1;Parent=Dca43574.1
scaffold4974	Augustus	exon	10761	11341	.	-	.	ID=Dca43574.1.exon2;Parent=Dca43574.1
scaffold4974	Augustus	exon	11442	11777	.	-	.	ID=Dca43574.1.exon3;Parent=Dca43574.1
scaffold4974	Augustus	exon	11865	12405	.	-	.	ID=Dca43574.1.exon4;Parent=Dca43574.1
scaffold4974	Augustus	exon	16478	16605	.	-	.	ID=Dca43574.1.exon5;Parent=Dca43574.1
scaffold4974	Augustus	exon	18403	18953	.	-	.	ID=Dca43574.1.exon6;Parent=Dca43574.1
scaffold4974	Augustus	exon	19504	19625	.	-	.	ID=Dca43574.1.exon7;Parent=Dca43574.1