Carnation DB

Dca43606.1

Annotation

6-exons
f-493
sp|E0CNX7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g08550#GO:0016021;GO:0050660;GO:0004506#2F0P1C
sp|D3K179_ARAEL#Squalene epoxidase#Aralia elata (Japanese angelica tree)#unknown#GO:0016021;GO:0050660;GO:0004506#2F0P1C
Repeat List (scaffold498)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43606.1	1	180	190	64.73	180	69	1e-69
Target_name	Start	End	Length	Cov(%)
sp\|E0CNX7_VITVI	330	509	523	34.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43606.1	1	180	190	61.57	180	65	9e-65
Target_name	Start	End	Length	Cov(%)
Os03t0231800-03	139	318	334	53.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold498	Augustus	mRNA	104179	106176	.	-	.	ID=Dca43606.1;Parent=Dca43606
scaffold498	Augustus	exon	104179	104271	.	-	.	ID=Dca43606.1.exon1;Parent=Dca43606.1
scaffold498	Augustus	exon	104404	104682	.	-	.	ID=Dca43606.1.exon2;Parent=Dca43606.1
scaffold498	Augustus	exon	104759	105062	.	-	.	ID=Dca43606.1.exon3;Parent=Dca43606.1
scaffold498	Augustus	exon	105134	105333	.	-	.	ID=Dca43606.1.exon4;Parent=Dca43606.1
scaffold498	Augustus	exon	105424	105592	.	-	.	ID=Dca43606.1.exon5;Parent=Dca43606.1
scaffold498	Augustus	exon	106157	106176	.	-	.	ID=Dca43606.1.exon6;Parent=Dca43606.1