Dca43617.1
Annotation
- 4-exons
- f-1
- sp|F6I5J7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0171g00080#GO:0016740#1F0P0C
- sp|B9GJS2_POPTR#Uridine kinase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_815577#GO:0005524;GO:0016773;GO:0004849#3F0P0C
- Repeat List (scaffold4984)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43617.1 |
1 |
128 |
129 |
95.34 |
128 |
97 |
3e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6I5J7_VITVI |
791 |
918 |
918 |
13.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43617.1 |
1 |
129 |
129 |
90.69 |
129 |
91 |
1e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G40870.1 |
356 |
484 |
486 |
26.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4984 |
Augustus |
mRNA |
14851 |
16487 |
. |
+ |
. |
ID=Dca43617.1;Parent=Dca43617 |
| scaffold4984 |
Augustus |
exon |
14851 |
14934 |
. |
+ |
. |
ID=Dca43617.1.exon1;Parent=Dca43617.1 |
| scaffold4984 |
Augustus |
exon |
15034 |
15106 |
. |
+ |
. |
ID=Dca43617.1.exon2;Parent=Dca43617.1 |
| scaffold4984 |
Augustus |
exon |
16152 |
16234 |
. |
+ |
. |
ID=Dca43617.1.exon3;Parent=Dca43617.1 |
| scaffold4984 |
Augustus |
exon |
16338 |
16487 |
. |
+ |
. |
ID=Dca43617.1.exon4;Parent=Dca43617.1 |
