Carnation DB

Dca43662.1

Annotation

5-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold4991)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43662.1	29	1437	1496	51	1409	51	0
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	21	1521	1553	96.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43662.1	364	1436	1496	25.33	1073	34	1e-173
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	413	1475	1539	69.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4991	Augustus	mRNA	26851	31737	.	-	.	ID=Dca43662.1;Parent=Dca43662
scaffold4991	Augustus	exon	26851	27023	.	-	.	ID=Dca43662.1.exon1;Parent=Dca43662.1
scaffold4991	Augustus	exon	27126	27602	.	-	.	ID=Dca43662.1.exon2;Parent=Dca43662.1
scaffold4991	Augustus	exon	27672	27976	.	-	.	ID=Dca43662.1.exon3;Parent=Dca43662.1
scaffold4991	Augustus	exon	28104	29833	.	-	.	ID=Dca43662.1.exon4;Parent=Dca43662.1
scaffold4991	Augustus	exon	29932	31737	.	-	.	ID=Dca43662.1.exon5;Parent=Dca43662.1