Carnation DB

Dca43698.1

Annotation

18-exons
f-1
sp|Q8GUB1_MESCR#Putative vacuolar ATPase subunit 100 kDa subunit#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=vpha-a#GO:0033177;GO:0015078;GO:0016787;GO:0015991#2F1P1C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43698.1	1	814	814	85.87	814	86	0
Target_name	Start	End	Length	Cov(%)
sp\|Q8GUB1_MESCR	1	816	816	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43698.1	10	814	814	78.74	805	80	0
Target_name	Start	End	Length	Cov(%)
AT4G39080.1	14	821	821	98.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augus-PASA	mRNA	65870	72913	.	-	.	ID=Dca43698.1;Parent=Dca43698
scaffold5	Augus-PASA	exon	65870	66074	.	-	.	ID=Dca43698.1.exon1;Parent=Dca43698.1
scaffold5	Augus-PASA	exon	66205	66264	.	-	.	ID=Dca43698.1.exon2;Parent=Dca43698.1
scaffold5	Augus-PASA	exon	66506	66699	.	-	.	ID=Dca43698.1.exon3;Parent=Dca43698.1
scaffold5	Augus-PASA	exon	66806	66889	.	-	.	ID=Dca43698.1.exon4;Parent=Dca43698.1
scaffold5	Augus-PASA	exon	67037	67220	.	-	.	ID=Dca43698.1.exon5;Parent=Dca43698.1
scaffold5	Augus-PASA	exon	67335	67541	.	-	.	ID=Dca43698.1.exon6;Parent=Dca43698.1
scaffold5	Augustus	exon	67625	67785	.	-	.	ID=Dca43698.1.exon7;Parent=Dca43698.1
scaffold5	Augustus	exon	68001	68154	.	-	.	ID=Dca43698.1.exon8;Parent=Dca43698.1
scaffold5	Augustus	exon	68396	68544	.	-	.	ID=Dca43698.1.exon9;Parent=Dca43698.1
scaffold5	Augustus	exon	68648	68755	.	-	.	ID=Dca43698.1.exon10;Parent=Dca43698.1
scaffold5	Augustus	exon	68890	68997	.	-	.	ID=Dca43698.1.exon11;Parent=Dca43698.1
scaffold5	Augustus	exon	69290	69427	.	-	.	ID=Dca43698.1.exon12;Parent=Dca43698.1
scaffold5	Augustus	exon	69621	69794	.	-	.	ID=Dca43698.1.exon13;Parent=Dca43698.1
scaffold5	Augustus	exon	69871	69950	.	-	.	ID=Dca43698.1.exon14;Parent=Dca43698.1
scaffold5	Augustus	exon	70219	70348	.	-	.	ID=Dca43698.1.exon15;Parent=Dca43698.1
scaffold5	Augustus	exon	70466	70588	.	-	.	ID=Dca43698.1.exon16;Parent=Dca43698.1
scaffold5	Augustus	exon	70942	70986	.	-	.	ID=Dca43698.1.exon17;Parent=Dca43698.1
scaffold5	Augustus	exon	72773	72913	.	-	.	ID=Dca43698.1.exon18;Parent=Dca43698.1