Carnation DB

Dca43778.1

Annotation

7-exons
f-1
sp|B9MZ11_POPTR#Calcium dependent protein kinase 6#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CPK6#GO:0005524;GO:0005509;GO:0004674#3F0P0C
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43778.1	1	565	566	82.68	565	83	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MZ11_POPTR	1	559	560	99.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43778.1	1	562	566	79.15	562	80	0
Target_name	Start	End	Length	Cov(%)
AT2G17290.1	1	544	544	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augustus	mRNA	768436	771159	.	-	.	ID=Dca43778.1;Parent=Dca43778
scaffold5	Augustus	exon	768436	768558	.	-	.	ID=Dca43778.1.exon1;Parent=Dca43778.1
scaffold5	Augus-PASA	exon	768644	768868	.	-	.	ID=Dca43778.1.exon2;Parent=Dca43778.1
scaffold5	Augus-PASA	exon	769123	769290	.	-	.	ID=Dca43778.1.exon3;Parent=Dca43778.1
scaffold5	Augus-PASA	exon	769472	769587	.	-	.	ID=Dca43778.1.exon4;Parent=Dca43778.1
scaffold5	Augus-PASA	exon	769681	769833	.	-	.	ID=Dca43778.1.exon5;Parent=Dca43778.1
scaffold5	Augustus	exon	769929	770072	.	-	.	ID=Dca43778.1.exon6;Parent=Dca43778.1
scaffold5	Augustus	exon	770388	771159	.	-	.	ID=Dca43778.1.exon7;Parent=Dca43778.1