Carnation DB

Dca43829.1

Annotation

14-exons
f-1
sp|B9RCI7_RICCO#Respiratory burst oxidase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1689300#GO:0016021;GO:0005509;GO:0009055;GO:0050660;GO:0005506;GO:0016174;GO:0004601#6F0P1C
Repeat List (scaffold50)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43829.1	1	91	93	43.01	91	44	6e-09
Target_name	Start	End	Length	Cov(%)
sp\|A9P859_POPTR	1	93	95	97.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43829.1	5	931	931	70.46	927	70	0
Target_name	Start	End	Length	Cov(%)
AT1G64060.1	10	944	944	99.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold50	Augus-PASA	mRNA	75303	82114	.	+	.	ID=Dca43829.1;Parent=Dca43829
scaffold50	Augus-PASA	exon	75303	75936	.	+	.	ID=Dca43829.1.exon1;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	76462	76621	.	+	.	ID=Dca43829.1.exon2;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	77567	77615	.	+	.	ID=Dca43829.1.exon3;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	78205	78318	.	+	.	ID=Dca43829.1.exon4;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	78430	78852	.	+	.	ID=Dca43829.1.exon5;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	79713	80102	.	+	.	ID=Dca43829.1.exon6;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	80195	80290	.	+	.	ID=Dca43829.1.exon7;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	80411	80526	.	+	.	ID=Dca43829.1.exon8;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	80731	80898	.	+	.	ID=Dca43829.1.exon9;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	80987	81146	.	+	.	ID=Dca43829.1.exon10;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	81263	81430	.	+	.	ID=Dca43829.1.exon11;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	81521	81649	.	+	.	ID=Dca43829.1.exon12;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	81823	81901	.	+	.	ID=Dca43829.1.exon13;Parent=Dca43829.1
scaffold50	Augus-PASA	exon	82005	82114	.	+	.	ID=Dca43829.1.exon14;Parent=Dca43829.1