Carnation DB

Dca43840.1

Annotation

5-exons
f-1
sp|F6HUS3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g01190#unknown#0F0P0C
Repeat List (scaffold50)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43840.1	2	44	955	2.82	43	63	2e-08
Target_name	Start	End	Length	Cov(%)
sp\|F6HUS3_VITVI	5	47	849	5.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43840.1	3	44	955	2.51	42	58	8e-08
Target_name	Start	End	Length	Cov(%)
AT2G46380.1	8	49	768	5.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold50	Augustus	mRNA	160873	165134	.	+	.	ID=Dca43840.1;Parent=Dca43840
scaffold50	Augustus	exon	160873	160978	.	+	.	ID=Dca43840.1.exon1;Parent=Dca43840.1
scaffold50	Augustus	exon	161328	163746	.	+	.	ID=Dca43840.1.exon2;Parent=Dca43840.1
scaffold50	Augustus	exon	164037	164097	.	+	.	ID=Dca43840.1.exon3;Parent=Dca43840.1
scaffold50	Augustus	exon	164194	164417	.	+	.	ID=Dca43840.1.exon4;Parent=Dca43840.1
scaffold50	Augustus	exon	165077	165134	.	+	.	ID=Dca43840.1.exon5;Parent=Dca43840.1