Carnation DB

Dca43880.1

Annotation

9-exons
f-1
sp|F6HA53_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0009g03190#unknown#0F0P0C
AT5G12170.2 | Symbols: CLT3 | CRT (chloroquine-resistance transporter)-like transporter 3 | chr5:3931649-3934961 FORWARD LENGTH=452
Repeat List (scaffold500)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43880.1	1	427	427	62.76	427	60	2e-137
Target_name	Start	End	Length	Cov(%)
sp\|F6HA53_VITVI	1	449	453	99.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43880.1	85	414	427	55.73	330	70	6e-122
Target_name	Start	End	Length	Cov(%)
Os01t0955700-01	81	421	440	77.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold500	Augustus	mRNA	47161	51598	.	+	.	ID=Dca43880.1;Parent=Dca43880
scaffold500	Augustus	exon	47161	47579	.	+	.	ID=Dca43880.1.exon1;Parent=Dca43880.1
scaffold500	Augustus	exon	48553	48703	.	+	.	ID=Dca43880.1.exon2;Parent=Dca43880.1
scaffold500	Augustus	exon	49201	49316	.	+	.	ID=Dca43880.1.exon3;Parent=Dca43880.1
scaffold500	Augustus	exon	49826	49925	.	+	.	ID=Dca43880.1.exon4;Parent=Dca43880.1
scaffold500	Augustus	exon	50048	50083	.	+	.	ID=Dca43880.1.exon5;Parent=Dca43880.1
scaffold500	Augustus	exon	50186	50236	.	+	.	ID=Dca43880.1.exon6;Parent=Dca43880.1
scaffold500	Augustus	exon	50338	50461	.	+	.	ID=Dca43880.1.exon7;Parent=Dca43880.1
scaffold500	Augustus	exon	50813	50938	.	+	.	ID=Dca43880.1.exon8;Parent=Dca43880.1
scaffold500	Augustus	exon	51438	51598	.	+	.	ID=Dca43880.1.exon9;Parent=Dca43880.1