Carnation DB

Dca43920.1

Annotation

18-exons
f-2
sp|F6HBY3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0018g01600#GO:0008239;GO:0006508#1F1P0C
AT1G79690.1 | Symbols: atnudt3, NUDT3 | nudix hydrolase homolog 3 | chr1:29985360-29990171 FORWARD LENGTH=772
Repeat List (scaffold5005)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43920.1	1	665	666	76.57	665	74	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HBY3_VITVI	88	778	782	88.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43920.1	1	666	666	69.96	666	68	0
Target_name	Start	End	Length	Cov(%)
AT1G79690.1	83	772	772	89.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5005	Augustus	mRNA	12160	21770	.	-	.	ID=Dca43920.1;Parent=Dca43920
scaffold5005	Augustus	exon	12160	12213	.	-	.	ID=Dca43920.1.exon1;Parent=Dca43920.1
scaffold5005	Augustus	exon	12573	12719	.	-	.	ID=Dca43920.1.exon2;Parent=Dca43920.1
scaffold5005	Augustus	exon	12994	13084	.	-	.	ID=Dca43920.1.exon3;Parent=Dca43920.1
scaffold5005	Augustus	exon	13161	13255	.	-	.	ID=Dca43920.1.exon4;Parent=Dca43920.1
scaffold5005	Augustus	exon	13856	13939	.	-	.	ID=Dca43920.1.exon5;Parent=Dca43920.1
scaffold5005	Augustus	exon	14462	14630	.	-	.	ID=Dca43920.1.exon6;Parent=Dca43920.1
scaffold5005	Augustus	exon	14775	14881	.	-	.	ID=Dca43920.1.exon7;Parent=Dca43920.1
scaffold5005	Augustus	exon	15044	15139	.	-	.	ID=Dca43920.1.exon8;Parent=Dca43920.1
scaffold5005	Augustus	exon	15706	15771	.	-	.	ID=Dca43920.1.exon9;Parent=Dca43920.1
scaffold5005	Augustus	exon	15954	16035	.	-	.	ID=Dca43920.1.exon10;Parent=Dca43920.1
scaffold5005	Augustus	exon	16124	16368	.	-	.	ID=Dca43920.1.exon11;Parent=Dca43920.1
scaffold5005	Augustus	exon	17592	17772	.	-	.	ID=Dca43920.1.exon12;Parent=Dca43920.1
scaffold5005	Augustus	exon	18093	18199	.	-	.	ID=Dca43920.1.exon13;Parent=Dca43920.1
scaffold5005	Augustus	exon	18879	18965	.	-	.	ID=Dca43920.1.exon14;Parent=Dca43920.1
scaffold5005	Augustus	exon	20203	20284	.	-	.	ID=Dca43920.1.exon15;Parent=Dca43920.1
scaffold5005	Augustus	exon	21009	21142	.	-	.	ID=Dca43920.1.exon16;Parent=Dca43920.1
scaffold5005	Augustus	exon	21480	21576	.	-	.	ID=Dca43920.1.exon17;Parent=Dca43920.1
scaffold5005	Augustus	exon	21693	21770	.	-	.	ID=Dca43920.1.exon18;Parent=Dca43920.1