Dca43930.1
Annotation
- 4-exons
- f-1
- sp|B9I7A9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_806754#GO:0003824#1F0P0C
- Os08t0512300-01 Similar to Rab geranylgeranyl transferase beta subunit (Fragment).
- Repeat List (scaffold5009)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43930.1 |
7 |
139 |
142 |
82.39 |
133 |
88 |
8e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I7A9_POPTR |
179 |
311 |
313 |
42.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43930.1 |
7 |
139 |
142 |
80.28 |
133 |
86 |
3e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0512300-01 |
183 |
315 |
320 |
41.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5009 |
Augustus |
mRNA |
2142 |
3077 |
. |
+ |
. |
ID=Dca43930.1;Parent=Dca43930 |
| scaffold5009 |
Augustus |
exon |
2142 |
2297 |
. |
+ |
. |
ID=Dca43930.1.exon1;Parent=Dca43930.1 |
| scaffold5009 |
Augustus |
exon |
2423 |
2521 |
. |
+ |
. |
ID=Dca43930.1.exon2;Parent=Dca43930.1 |
| scaffold5009 |
Augustus |
exon |
2616 |
2691 |
. |
+ |
. |
ID=Dca43930.1.exon3;Parent=Dca43930.1 |
| scaffold5009 |
Augustus |
exon |
2980 |
3077 |
. |
+ |
. |
ID=Dca43930.1.exon4;Parent=Dca43930.1 |
