Dca43957.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold5013)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43957.1 |
1 |
610 |
733 |
40.79 |
610 |
49 |
1e-142
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
231 |
750 |
1717 |
30.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43957.1 |
332 |
424 |
733 |
4.77 |
93 |
38 |
7e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5013 |
Augustus |
mRNA |
13 |
4142 |
. |
+ |
. |
ID=Dca43957.1;Parent=Dca43957 |
| scaffold5013 |
Augustus |
exon |
13 |
1660 |
. |
+ |
. |
ID=Dca43957.1.exon1;Parent=Dca43957.1 |
| scaffold5013 |
Augustus |
exon |
1771 |
2166 |
. |
+ |
. |
ID=Dca43957.1.exon2;Parent=Dca43957.1 |
| scaffold5013 |
Augustus |
exon |
3985 |
4142 |
. |
+ |
. |
ID=Dca43957.1.exon3;Parent=Dca43957.1 |
