Carnation DB

Dca43967.1

Annotation

9-exons
f-1
sp|B9HHK3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_419433#GO:0005488#1F0P0C
AT2G39910.1 | Symbols: | ARM repeat superfamily protein | chr2:16660604-16662886 FORWARD LENGTH=436
Repeat List (scaffold5017)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43967.1	12	368	380	59.47	357	63	7e-131
Target_name	Start	End	Length	Cov(%)
sp\|B9HHK3_POPTR	53	412	412	87.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43967.1	30	371	380	51.57	342	57	6e-109
Target_name	Start	End	Length	Cov(%)
AT2G39910.1	87	431	436	79.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5017	Augustus	mRNA	11535	14375	.	+	.	ID=Dca43967.1;Parent=Dca43967
scaffold5017	Augustus	exon	11535	11604	.	+	.	ID=Dca43967.1.exon1;Parent=Dca43967.1
scaffold5017	Augustus	exon	11769	12091	.	+	.	ID=Dca43967.1.exon2;Parent=Dca43967.1
scaffold5017	Augustus	exon	12702	12788	.	+	.	ID=Dca43967.1.exon3;Parent=Dca43967.1
scaffold5017	Augustus	exon	13014	13204	.	+	.	ID=Dca43967.1.exon4;Parent=Dca43967.1
scaffold5017	Augustus	exon	13297	13492	.	+	.	ID=Dca43967.1.exon5;Parent=Dca43967.1
scaffold5017	Augustus	exon	13579	13643	.	+	.	ID=Dca43967.1.exon6;Parent=Dca43967.1
scaffold5017	Augustus	exon	13859	13960	.	+	.	ID=Dca43967.1.exon7;Parent=Dca43967.1
scaffold5017	Augustus	exon	14074	14170	.	+	.	ID=Dca43967.1.exon8;Parent=Dca43967.1
scaffold5017	Augustus	exon	14364	14375	.	+	.	ID=Dca43967.1.exon9;Parent=Dca43967.1