Dca44003.1
Annotation
- 4-exons
- f-1
- sp|B9IBC9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573381#unknown#0F0P0C
- AT2G20330.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:8772888-8775518 REVERSE LENGTH=648
- Repeat List (scaffold5022)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44003.1 |
2 |
256 |
257 |
69.64 |
255 |
56 |
5e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IBC9_POPTR |
3 |
321 |
647 |
49.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44003.1 |
1 |
256 |
257 |
62.25 |
256 |
50 |
2e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G20330.1 |
1 |
318 |
648 |
49.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5022 |
Augustus |
mRNA |
19317 |
22800 |
. |
+ |
. |
ID=Dca44003.1;Parent=Dca44003 |
| scaffold5022 |
Augustus |
exon |
19317 |
19706 |
. |
+ |
. |
ID=Dca44003.1.exon1;Parent=Dca44003.1 |
| scaffold5022 |
Augustus |
exon |
20833 |
21045 |
. |
+ |
. |
ID=Dca44003.1.exon2;Parent=Dca44003.1 |
| scaffold5022 |
Augustus |
exon |
21170 |
21328 |
. |
+ |
. |
ID=Dca44003.1.exon3;Parent=Dca44003.1 |
| scaffold5022 |
Augustus |
exon |
22789 |
22800 |
. |
+ |
. |
ID=Dca44003.1.exon4;Parent=Dca44003.1 |
