Dca44016.1
Annotation
- 3-exons
- f-1
- sp|A5C108_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_025727#GO:0046872;GO:0030001#1F1P0C
- Os01t0309800-01 Similar to Hydrogenase expression/formation protein hypB.
- Repeat List (scaffold5026)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44016.1 |
179 |
387 |
387 |
19.89 |
209 |
37 |
2e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C108_VITVI |
146 |
288 |
288 |
49.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44016.1 |
318 |
386 |
387 |
8.01 |
69 |
45 |
5e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0309800-01 |
179 |
247 |
249 |
27.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5026 |
Augustus |
mRNA |
12428 |
13789 |
. |
+ |
. |
ID=Dca44016.1;Parent=Dca44016 |
| scaffold5026 |
Augustus |
exon |
12428 |
12445 |
. |
+ |
. |
ID=Dca44016.1.exon1;Parent=Dca44016.1 |
| scaffold5026 |
Augustus |
exon |
12549 |
12633 |
. |
+ |
. |
ID=Dca44016.1.exon2;Parent=Dca44016.1 |
| scaffold5026 |
Augustus |
exon |
12729 |
13789 |
. |
+ |
. |
ID=Dca44016.1.exon3;Parent=Dca44016.1 |
