Carnation DB

Dca44035.1

Annotation

6-exons
f-1
sp|B9MZI7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595474#unknown#0F0P0C
Os08t0508600-01 Similar to Pre-rRNA-processing protein TSR2.
Repeat List (scaffold503)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44035.1	148	199	289	10.38	52	57	1e-06
Target_name	Start	End	Length	Cov(%)
sp\|B9MZI7_POPTR	81	133	213	24.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44035.1	128	198	289	10.38	71	41	1e-06
Target_name	Start	End	Length	Cov(%)
AT5G27990.1	45	118	184	40.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold503	Augustus	mRNA	44012	46453	.	+	.	ID=Dca44035.1;Parent=Dca44035
scaffold503	Augustus	exon	44012	44189	.	+	.	ID=Dca44035.1.exon1;Parent=Dca44035.1
scaffold503	Augustus	exon	44381	44466	.	+	.	ID=Dca44035.1.exon2;Parent=Dca44035.1
scaffold503	Augustus	exon	44708	44836	.	+	.	ID=Dca44035.1.exon3;Parent=Dca44035.1
scaffold503	Augustus	exon	45333	45455	.	+	.	ID=Dca44035.1.exon4;Parent=Dca44035.1
scaffold503	Augustus	exon	45690	45818	.	+	.	ID=Dca44035.1.exon5;Parent=Dca44035.1
scaffold503	Augustus	exon	46229	46453	.	+	.	ID=Dca44035.1.exon6;Parent=Dca44035.1