Carnation DB

Dca44070.1

Annotation

5-exons
f-1
sp|B9GJU1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_847263#unknown#0F0P0C
AT3G01920.1 | Symbols: | DHBP synthase RibB-like alpha/beta domain | chr3:317449-319001 FORWARD LENGTH=307
Repeat List (scaffold5039)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44070.1	1	178	180	67.77	178	69	9e-71
Target_name	Start	End	Length	Cov(%)
sp\|B9GJU1_POPTR	143	320	322	55.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44070.1	1	166	180	63.33	166	69	3e-67
Target_name	Start	End	Length	Cov(%)
AT3G01920.1	130	295	307	54.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5039	Augustus	mRNA	113	2064	.	+	.	ID=Dca44070.1;Parent=Dca44070
scaffold5039	Augustus	exon	113	235	.	+	.	ID=Dca44070.1.exon1;Parent=Dca44070.1
scaffold5039	Augustus	exon	617	783	.	+	.	ID=Dca44070.1.exon2;Parent=Dca44070.1
scaffold5039	Augustus	exon	1006	1075	.	+	.	ID=Dca44070.1.exon3;Parent=Dca44070.1
scaffold5039	Augustus	exon	1206	1304	.	+	.	ID=Dca44070.1.exon4;Parent=Dca44070.1
scaffold5039	Augustus	exon	1981	2064	.	+	.	ID=Dca44070.1.exon5;Parent=Dca44070.1