Carnation DB

Dca4419.1

Annotation

8-exons
f-1
sp|D7U731_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0013g00130#GO:0005525#1F0P0C
AT4G10650.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:6574472-6576231 REVERSE LENGTH=377
Repeat List (scaffold1166)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4419.1	1	383	383	53.52	383	53	9e-107
Target_name	Start	End	Length	Cov(%)
sp\|D7U731_VITVI	3	364	369	98.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4419.1	4	381	383	49.86	378	50	7e-96
Target_name	Start	End	Length	Cov(%)
AT4G10650.1	9	365	377	94.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1166	Augustus	mRNA	40225	42840	.	-	.	ID=Dca4419.1;Parent=Dca4419
scaffold1166	Augustus	exon	40225	40461	.	-	.	ID=Dca4419.1.exon1;Parent=Dca4419.1
scaffold1166	Augustus	exon	40756	41027	.	-	.	ID=Dca4419.1.exon2;Parent=Dca4419.1
scaffold1166	Augus-PASA	exon	41260	41356	.	-	.	ID=Dca4419.1.exon3;Parent=Dca4419.1
scaffold1166	Augus-PASA	exon	41445	41515	.	-	.	ID=Dca4419.1.exon4;Parent=Dca4419.1
scaffold1166	Augus-PASA	exon	41854	42004	.	-	.	ID=Dca4419.1.exon5;Parent=Dca4419.1
scaffold1166	Augustus	exon	42236	42313	.	-	.	ID=Dca4419.1.exon6;Parent=Dca4419.1
scaffold1166	Augustus	exon	42488	42589	.	-	.	ID=Dca4419.1.exon7;Parent=Dca4419.1
scaffold1166	Augustus	exon	42697	42840	.	-	.	ID=Dca4419.1.exon8;Parent=Dca4419.1