Dca44325.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5097)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44325.1 |
1 |
202 |
204 |
63.72 |
202 |
57 |
2e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1085 |
1313 |
1313 |
17.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44325.1 |
6 |
187 |
204 |
33.82 |
182 |
34 |
4e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1382 |
1401 |
14.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5097 |
Augustus |
mRNA |
16872 |
17568 |
. |
- |
. |
ID=Dca44325.1;Parent=Dca44325 |
| scaffold5097 |
Augustus |
exon |
16872 |
17254 |
. |
- |
. |
ID=Dca44325.1.exon1;Parent=Dca44325.1 |
| scaffold5097 |
Augustus |
exon |
17337 |
17568 |
. |
- |
. |
ID=Dca44325.1.exon2;Parent=Dca44325.1 |
