Carnation DB

Dca44388.1

Annotation

7-exons
f-1
sp|B9RLS8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1470550#unknown#0F0P0C
Os06t0235300-01 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain containing protein.
Repeat List (scaffold5104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44388.1	10	1703	1708	54.8	1694	50	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RLS8_RICCO	9	1807	1809	99.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44388.1	356	494	1708	5.26	139	65	1e-46
Target_name	Start	End	Length	Cov(%)
Os06t0235300-01	301	438	997	13.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5104	Augus-PASA	mRNA	18527	26709	.	-	.	ID=Dca44388.1;Parent=Dca44388
scaffold5104	Augus-PASA	exon	18527	19030	.	-	.	ID=Dca44388.1.exon1;Parent=Dca44388.1
scaffold5104	Augustus	exon	19118	19228	.	-	.	ID=Dca44388.1.exon2;Parent=Dca44388.1
scaffold5104	Augustus	exon	19955	20059	.	-	.	ID=Dca44388.1.exon3;Parent=Dca44388.1
scaffold5104	Augustus	exon	20381	21421	.	-	.	ID=Dca44388.1.exon4;Parent=Dca44388.1
scaffold5104	Augustus	exon	21732	23690	.	-	.	ID=Dca44388.1.exon5;Parent=Dca44388.1
scaffold5104	Augustus	exon	24136	25479	.	-	.	ID=Dca44388.1.exon6;Parent=Dca44388.1
scaffold5104	Augustus	exon	26647	26709	.	-	.	ID=Dca44388.1.exon7;Parent=Dca44388.1