Carnation DB

Dca44394.1

Annotation

6-exons
f-1
sp|A5BCG2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_020539#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold5105)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44394.1	264	1140	1141	33.91	877	42	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BCG2_VITVI	13	894	895	98.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44394.1	268	508	1141	6.39	241	31	5e-36
Target_name	Start	End	Length	Cov(%)
Os08t0202300-03	16	255	591	40.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5105	Augustus	mRNA	26323	30572	.	+	.	ID=Dca44394.1;Parent=Dca44394
scaffold5105	Augustus	exon	26323	26442	.	+	.	ID=Dca44394.1.exon1;Parent=Dca44394.1
scaffold5105	Augustus	exon	26650	27210	.	+	.	ID=Dca44394.1.exon2;Parent=Dca44394.1
scaffold5105	Augustus	exon	27304	27411	.	+	.	ID=Dca44394.1.exon3;Parent=Dca44394.1
scaffold5105	Augustus	exon	27517	28271	.	+	.	ID=Dca44394.1.exon4;Parent=Dca44394.1
scaffold5105	Augustus	exon	28484	29294	.	+	.	ID=Dca44394.1.exon5;Parent=Dca44394.1
scaffold5105	Augustus	exon	29502	30572	.	+	.	ID=Dca44394.1.exon6;Parent=Dca44394.1