Dca44482.1
Annotation
- 2-exons
- f-1
- sp|Q6L3I5_SOLDE#Leucine Rich Repeat family protein#Solanum demissum (Wild potato)#ORFNames=SDM1_3t00005#GO:0016021;GO:0005524;GO:0004674#2F0P1C
- Repeat List (scaffold512)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44482.1 |
517 |
674 |
1089 |
5.6 |
158 |
34 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3I5_SOLDE |
101 |
282 |
1248 |
14.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44482.1 |
408 |
672 |
1089 |
8.99 |
265 |
37 |
5e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G20140.1 |
65 |
331 |
1249 |
21.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold512 |
Augustus |
mRNA |
75572 |
78934 |
. |
+ |
. |
ID=Dca44482.1;Parent=Dca44482 |
| scaffold512 |
Augustus |
exon |
75572 |
78470 |
. |
+ |
. |
ID=Dca44482.1.exon1;Parent=Dca44482.1 |
| scaffold512 |
Augustus |
exon |
78564 |
78934 |
. |
+ |
. |
ID=Dca44482.1.exon2;Parent=Dca44482.1 |
