Carnation DB

Dca44612.1

Annotation

6-exons
f-1
sp|B9IPZ2_POPTR#Chromo domain protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CRD901#GO:0005634#0F0P1C
Repeat List (scaffold5145)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44612.1	99	413	425	30.35	315	37	1e-48
Target_name	Start	End	Length	Cov(%)
sp\|B9IPZ2_POPTR	86	428	435	78.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44612.1	101	413	425	27.52	313	37	2e-41
Target_name	Start	End	Length	Cov(%)
Os10t0324900-01	101	406	416	73.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5145	Augustus	mRNA	17272	20353	.	+	.	ID=Dca44612.1;Parent=Dca44612
scaffold5145	Augustus	exon	17272	17628	.	+	.	ID=Dca44612.1.exon1;Parent=Dca44612.1
scaffold5145	Augustus	exon	17770	17795	.	+	.	ID=Dca44612.1.exon2;Parent=Dca44612.1
scaffold5145	Augustus	exon	18908	18994	.	+	.	ID=Dca44612.1.exon3;Parent=Dca44612.1
scaffold5145	Augustus	exon	19106	19408	.	+	.	ID=Dca44612.1.exon4;Parent=Dca44612.1
scaffold5145	Augustus	exon	19504	19887	.	+	.	ID=Dca44612.1.exon5;Parent=Dca44612.1
scaffold5145	Augustus	exon	20233	20353	.	+	.	ID=Dca44612.1.exon6;Parent=Dca44612.1