Dca44815.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold5192)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44815.1 |
141 |
224 |
230 |
18.69 |
84 |
51 |
4e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
876 |
960 |
964 |
8.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44815.1 |
84 |
195 |
230 |
15.65 |
112 |
32 |
4e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
872 |
969 |
1401 |
6.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5192 |
Augustus |
mRNA |
3587 |
5661 |
. |
+ |
. |
ID=Dca44815.1;Parent=Dca44815 |
| scaffold5192 |
Augustus |
exon |
3587 |
4025 |
. |
+ |
. |
ID=Dca44815.1.exon1;Parent=Dca44815.1 |
| scaffold5192 |
Augustus |
exon |
5408 |
5661 |
. |
+ |
. |
ID=Dca44815.1.exon2;Parent=Dca44815.1 |
