Carnation DB

Dca44850.1

Annotation

5-exons
f-1
sp|B9GVH0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_554200#GO:0016021;GO:0006857#0F1P1C
AT1G12110.1 | Symbols: NRT1.1, CHL1-1, NRT1, B-1, ATNRT1, CHL1 | nitrate transporter 1.1 | chr1:4105341-4109290 FORWARD LENGTH=590
Repeat List (scaffold52)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44850.1	23	583	585	68.37	561	71	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GVH0_POPTR	11	576	583	97.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44850.1	16	584	585	60.51	569	61	0
Target_name	Start	End	Length	Cov(%)
AT1G12110.1	5	583	590	98.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold52	Augustus	mRNA	183786	186665	.	-	.	ID=Dca44850.1;Parent=Dca44850
scaffold52	Augustus	exon	183786	184623	.	-	.	ID=Dca44850.1.exon1;Parent=Dca44850.1
scaffold52	Augustus	exon	184721	185274	.	-	.	ID=Dca44850.1.exon2;Parent=Dca44850.1
scaffold52	Augustus	exon	185510	185549	.	-	.	ID=Dca44850.1.exon3;Parent=Dca44850.1
scaffold52	Augustus	exon	185861	186038	.	-	.	ID=Dca44850.1.exon4;Parent=Dca44850.1
scaffold52	Augustus	exon	186518	186665	.	-	.	ID=Dca44850.1.exon5;Parent=Dca44850.1