Dca44890.1
Annotation
- 3-exons
- f-1
- sp|A5AKV0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_035671#GO:0003676;GO:0015074#1F1P0C
- Os01t0650800-01 Transposon, En/Spm-like domain containing protein.
- Repeat List (scaffold5207)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44890.1 |
78 |
129 |
330 |
10.3 |
52 |
66 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AKV0_VITVI |
1188 |
1239 |
2067 |
2.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44890.1 |
132 |
323 |
330 |
26.06 |
192 |
45 |
2e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0650800-01 |
134 |
322 |
333 |
56.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5207 |
Augustus |
mRNA |
3059 |
4643 |
. |
- |
. |
ID=Dca44890.1;Parent=Dca44890 |
| scaffold5207 |
Augustus |
exon |
3059 |
3660 |
. |
- |
. |
ID=Dca44890.1.exon1;Parent=Dca44890.1 |
| scaffold5207 |
Augustus |
exon |
4110 |
4493 |
. |
- |
. |
ID=Dca44890.1.exon2;Parent=Dca44890.1 |
| scaffold5207 |
Augustus |
exon |
4637 |
4643 |
. |
- |
. |
ID=Dca44890.1.exon3;Parent=Dca44890.1 |
