Dca44912.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5211)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44912.1 |
1 |
219 |
317 |
45.74 |
219 |
58 |
1e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
726 |
978 |
1553 |
16.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44912.1 |
18 |
207 |
317 |
23.02 |
190 |
38 |
4e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
202 |
394 |
591 |
32.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5211 |
Augustus |
mRNA |
13872 |
24313 |
. |
+ |
. |
ID=Dca44912.1;Parent=Dca44912 |
| scaffold5211 |
Augustus |
exon |
13872 |
13922 |
. |
+ |
. |
ID=Dca44912.1.exon1;Parent=Dca44912.1 |
| scaffold5211 |
Augustus |
exon |
14014 |
14633 |
. |
+ |
. |
ID=Dca44912.1.exon2;Parent=Dca44912.1 |
| scaffold5211 |
Augustus |
exon |
17934 |
18066 |
. |
+ |
. |
ID=Dca44912.1.exon3;Parent=Dca44912.1 |
| scaffold5211 |
Augustus |
exon |
24164 |
24313 |
. |
+ |
. |
ID=Dca44912.1.exon4;Parent=Dca44912.1 |
