Dca44945.1
Annotation
- 4-exons
- f-1399
- sp|B9HR11_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1086376#unknown#0F0P0C
- Repeat List (scaffold522)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44945.1 |
21 |
143 |
246 |
18.69 |
123 |
36 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HR11_POPTR |
276 |
392 |
410 |
28.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44945.1 |
32 |
158 |
246 |
15.44 |
127 |
30 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G17030.1 |
291 |
407 |
407 |
28.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold522 |
Augustus |
mRNA |
24935 |
27329 |
. |
+ |
. |
ID=Dca44945.1;Parent=Dca44945 |
| scaffold522 |
Augustus |
exon |
24935 |
26211 |
. |
+ |
. |
ID=Dca44945.1.exon1;Parent=Dca44945.1 |
| scaffold522 |
Augustus |
exon |
26312 |
26412 |
. |
+ |
. |
ID=Dca44945.1.exon2;Parent=Dca44945.1 |
| scaffold522 |
Augustus |
exon |
26469 |
26919 |
. |
+ |
. |
ID=Dca44945.1.exon3;Parent=Dca44945.1 |
| scaffold522 |
Augustus |
exon |
27020 |
27329 |
. |
+ |
. |
ID=Dca44945.1.exon4;Parent=Dca44945.1 |
