Carnation DB

Dca44952.1

Annotation

6-exons
f-1
sp|B9SDG2_RICCO#30S ribosomal protein S5, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1517490#GO:0005840;GO:0003723;GO:0003735;GO:0006412#2F1P1C
Repeat List (scaffold522)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44952.1	6	435	436	48.85	430	43	4e-91
Target_name	Start	End	Length	Cov(%)
sp\|B9SDG2_RICCO	2	486	502	96.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44952.1	7	429	436	43.57	423	40	1e-81
Target_name	Start	End	Length	Cov(%)
AT1G64880.1	19	495	515	92.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold522	Augustus	mRNA	74777	77626	.	-	.	ID=Dca44952.1;Parent=Dca44952
scaffold522	Augustus	exon	74777	74863	.	-	.	ID=Dca44952.1.exon1;Parent=Dca44952.1
scaffold522	Augustus	exon	74954	75052	.	-	.	ID=Dca44952.1.exon2;Parent=Dca44952.1
scaffold522	Augustus	exon	75504	75611	.	-	.	ID=Dca44952.1.exon3;Parent=Dca44952.1
scaffold522	Augustus	exon	75696	75746	.	-	.	ID=Dca44952.1.exon4;Parent=Dca44952.1
scaffold522	Augustus	exon	76293	76801	.	-	.	ID=Dca44952.1.exon5;Parent=Dca44952.1
scaffold522	Augustus	exon	77170	77626	.	-	.	ID=Dca44952.1.exon6;Parent=Dca44952.1