Dca45000.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold523)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45000.1 |
193 |
341 |
347 |
25.93 |
149 |
61 |
1e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
745 |
893 |
896 |
16.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45000.1 |
43 |
191 |
347 |
16.42 |
149 |
37 |
2e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
824 |
976 |
1401 |
10.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold523 |
Augustus |
mRNA |
138937 |
140926 |
. |
+ |
. |
ID=Dca45000.1;Parent=Dca45000 |
| scaffold523 |
Augustus |
exon |
138937 |
139510 |
. |
+ |
. |
ID=Dca45000.1.exon1;Parent=Dca45000.1 |
| scaffold523 |
Augustus |
exon |
140457 |
140926 |
. |
+ |
. |
ID=Dca45000.1.exon2;Parent=Dca45000.1 |
