Carnation DB

Dca45146.1

Annotation

5-exons
f-1
sp|B9S0E1_RICCO#Pectate lyase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1353560#GO:0030570#1F0P0C
Repeat List (scaffold5265)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45146.1	1	416	419	75.17	416	75	7e-178
Target_name	Start	End	Length	Cov(%)
sp\|B9S0E1_RICCO	50	471	483	87.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45146.1	1	416	419	72.31	416	73	2e-175
Target_name	Start	End	Length	Cov(%)
AT3G53190.1	53	471	483	86.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5265	Augustus	mRNA	8997	18497	.	+	.	ID=Dca45146.1;Parent=Dca45146
scaffold5265	Augustus	exon	8997	9299	.	+	.	ID=Dca45146.1.exon1;Parent=Dca45146.1
scaffold5265	Augustus	exon	9752	10141	.	+	.	ID=Dca45146.1.exon2;Parent=Dca45146.1
scaffold5265	Augustus	exon	10617	10808	.	+	.	ID=Dca45146.1.exon3;Parent=Dca45146.1
scaffold5265	Augustus	exon	16691	16893	.	+	.	ID=Dca45146.1.exon4;Parent=Dca45146.1
scaffold5265	Augustus	exon	18326	18497	.	+	.	ID=Dca45146.1.exon5;Parent=Dca45146.1