Dca45222.1
Annotation
- 3-exons
- f-1
- sp|A5ARU8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_030566#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- sp|Q6AUT8_ORYSJ#Putative gag-pol#Oryza sativa subsp japonica (Rice)#Name=OJ1324_A07.9#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold528)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45222.1 |
9 |
454 |
454 |
48.67 |
446 |
41 |
2e-104
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ARU8_VITVI |
37 |
582 |
961 |
56.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45222.1 |
16 |
229 |
454 |
16.74 |
214 |
36 |
8e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
613 |
821 |
1539 |
13.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold528 |
Augustus |
mRNA |
106636 |
108379 |
. |
- |
. |
ID=Dca45222.1;Parent=Dca45222 |
| scaffold528 |
Augustus |
exon |
106636 |
107027 |
. |
- |
. |
ID=Dca45222.1.exon1;Parent=Dca45222.1 |
| scaffold528 |
Augustus |
exon |
107155 |
107420 |
. |
- |
. |
ID=Dca45222.1.exon2;Parent=Dca45222.1 |
| scaffold528 |
Augustus |
exon |
107673 |
108379 |
. |
- |
. |
ID=Dca45222.1.exon3;Parent=Dca45222.1 |
