Carnation DB

Dca45226.1

Annotation

5-exons
f-1
sp|B9I7B3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570757#unknown#0F0P0C
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-9944507 REVERSE LENGTH=642
Repeat List (scaffold528)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45226.1	80	338	345	37.68	259	47	2e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9I7B3_POPTR	290	567	646	43.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45226.1	79	338	345	35.07	260	44	3e-50
Target_name	Start	End	Length	Cov(%)
AT5G27920.1	285	563	642	43.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold528	Augustus	mRNA	155441	158099	.	-	.	ID=Dca45226.1;Parent=Dca45226
scaffold528	Augustus	exon	155441	155764	.	-	.	ID=Dca45226.1.exon1;Parent=Dca45226.1
scaffold528	Augustus	exon	155909	155982	.	-	.	ID=Dca45226.1.exon2;Parent=Dca45226.1
scaffold528	Augustus	exon	156077	156476	.	-	.	ID=Dca45226.1.exon3;Parent=Dca45226.1
scaffold528	Augustus	exon	156590	156685	.	-	.	ID=Dca45226.1.exon4;Parent=Dca45226.1
scaffold528	Augustus	exon	157956	158099	.	-	.	ID=Dca45226.1.exon5;Parent=Dca45226.1