Dca45381.1
Annotation
- 2-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5311)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45381.1 |
24 |
119 |
119 |
53.78 |
96 |
67 |
3e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
325 |
420 |
1038 |
9.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45381.1 |
29 |
118 |
119 |
24.36 |
90 |
33 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
356 |
444 |
1428 |
6.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5311 |
Augustus |
mRNA |
8675 |
9518 |
. |
+ |
. |
ID=Dca45381.1;Parent=Dca45381 |
| scaffold5311 |
Augustus |
exon |
8675 |
8747 |
. |
+ |
. |
ID=Dca45381.1.exon1;Parent=Dca45381.1 |
| scaffold5311 |
Augustus |
exon |
9232 |
9518 |
. |
+ |
. |
ID=Dca45381.1.exon2;Parent=Dca45381.1 |
