Dca45509.1
Annotation
- 4-exons
- f-1
- sp|F6HZT9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g04860#GO:0009055;GO:0015035;GO:0045454#2F1P0C
- sp|B7U333_9ROSI#Glutaredoxin S12#Populus tremula x Populus tremuloides#unknown#GO:0009055;GO:0015035;GO:0045454#2F1P0C
- Repeat List (scaffold5344)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45509.1 |
72 |
175 |
175 |
50.28 |
104 |
78 |
5e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HZT9_VITVI |
66 |
178 |
178 |
63.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45509.1 |
75 |
175 |
175 |
43.42 |
101 |
70 |
5e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G28730.1 |
65 |
174 |
174 |
63.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5344 |
Augus-PASA |
mRNA |
6638 |
9354 |
. |
+ |
. |
ID=Dca45509.1;Parent=Dca45509 |
| scaffold5344 |
Augus-PASA |
exon |
6638 |
6939 |
. |
+ |
. |
ID=Dca45509.1.exon1;Parent=Dca45509.1 |
| scaffold5344 |
Augus-PASA |
exon |
7416 |
7489 |
. |
+ |
. |
ID=Dca45509.1.exon2;Parent=Dca45509.1 |
| scaffold5344 |
Augustus |
exon |
8493 |
8567 |
. |
+ |
. |
ID=Dca45509.1.exon3;Parent=Dca45509.1 |
| scaffold5344 |
Augustus |
exon |
9278 |
9354 |
. |
+ |
. |
ID=Dca45509.1.exon4;Parent=Dca45509.1 |
