Carnation DB

Dca45511.1

Annotation

5-exons
f-1
sp|A2Z337_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_32038#GO:0005622;GO:0005525;GO:0003924;GO:0003743#3F0P1C
Os09t0515500-01 Translation initiation factor 2 related domain containing protein.
Repeat List (scaffold5344)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45511.1	30	661	661	66.71	632	70	0
Target_name	Start	End	Length	Cov(%)
sp\|A2Z337_ORYSI	89	716	716	87.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45511.1	30	661	661	66.56	632	70	0
Target_name	Start	End	Length	Cov(%)
Os09t0515500-01	89	716	717	87.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5344	Augustus	mRNA	20242	23363	.	-	.	ID=Dca45511.1;Parent=Dca45511
scaffold5344	Augustus	exon	20242	20676	.	-	.	ID=Dca45511.1.exon1;Parent=Dca45511.1
scaffold5344	Augustus	exon	20788	20937	.	-	.	ID=Dca45511.1.exon2;Parent=Dca45511.1
scaffold5344	Augustus	exon	21140	22192	.	-	.	ID=Dca45511.1.exon3;Parent=Dca45511.1
scaffold5344	Augustus	exon	22385	22709	.	-	.	ID=Dca45511.1.exon4;Parent=Dca45511.1
scaffold5344	Augustus	exon	23341	23363	.	-	.	ID=Dca45511.1.exon5;Parent=Dca45511.1