Dca45530.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold535)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45530.1 |
9 |
498 |
570 |
49.82 |
490 |
55 |
2e-135
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
271 |
749 |
1717 |
27.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45530.1 |
277 |
351 |
570 |
4.91 |
75 |
38 |
3e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0122300-01 |
77 |
150 |
150 |
49.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold535 |
Augustus |
mRNA |
21052 |
22836 |
. |
- |
. |
ID=Dca45530.1;Parent=Dca45530 |
| scaffold535 |
Augustus |
exon |
21052 |
21341 |
. |
- |
. |
ID=Dca45530.1.exon1;Parent=Dca45530.1 |
| scaffold535 |
Augustus |
exon |
21414 |
22836 |
. |
- |
. |
ID=Dca45530.1.exon2;Parent=Dca45530.1 |
