Dca45559.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold5356)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45559.1 |
310 |
585 |
1116 |
12.72 |
276 |
52 |
4e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
421 |
681 |
1717 |
15.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45559.1 |
914 |
1104 |
1116 |
5.91 |
191 |
35 |
1e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
237 |
408 |
707 |
24.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5356 |
Augustus |
mRNA |
10146 |
15441 |
. |
- |
. |
ID=Dca45559.1;Parent=Dca45559 |
| scaffold5356 |
Augustus |
exon |
10146 |
11756 |
. |
- |
. |
ID=Dca45559.1.exon1;Parent=Dca45559.1 |
| scaffold5356 |
Augustus |
exon |
13621 |
14433 |
. |
- |
. |
ID=Dca45559.1.exon2;Parent=Dca45559.1 |
| scaffold5356 |
Augustus |
exon |
14515 |
15441 |
. |
- |
. |
ID=Dca45559.1.exon3;Parent=Dca45559.1 |
