Dca45578.1
Annotation
- 3-exons
- f-1
- sp|A9PGH1_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#unknown#0F0P0C
- Os01t0104400-03 Ricin B-related lectin domain containing protein.
- Repeat List (scaffold536)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45578.1 |
24 |
209 |
232 |
43.96 |
186 |
48 |
4e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PGH1_POPTR |
99 |
306 |
346 |
60.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45578.1 |
27 |
209 |
232 |
41.37 |
183 |
46 |
9e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0104400-03 |
37 |
230 |
269 |
72.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold536 |
Augustus |
mRNA |
75884 |
76994 |
. |
- |
. |
ID=Dca45578.1;Parent=Dca45578 |
| scaffold536 |
Augustus |
exon |
75884 |
76069 |
. |
- |
. |
ID=Dca45578.1.exon1;Parent=Dca45578.1 |
| scaffold536 |
Augus-PASA |
exon |
76249 |
76368 |
. |
- |
. |
ID=Dca45578.1.exon2;Parent=Dca45578.1 |
| scaffold536 |
Augus-PASA |
exon |
76602 |
76994 |
. |
- |
. |
ID=Dca45578.1.exon3;Parent=Dca45578.1 |
